Index A | D | G | M | N | P | R | S | W A add_labels() (in module scripts.preprocessing.preprocessing) D determine_seq_technology() (in module scripts.preprocessing.preprocessing) G get_args() (in module scripts.preprocessing.preprocessing) (in module scripts.preprocessing.subsample) get_counts_from_tpm() (in module scripts.preprocessing.preprocessing) get_counts_per_cell() (in module scripts.preprocessing.preprocessing) get_tpm_counts() (in module scripts.preprocessing.preprocessing) M main() (in module scripts.preprocessing.preprocessing) (in module scripts.preprocessing.subsample) make_datadir() (in module scripts.preprocessing.preprocessing) module scripts.preprocessing.preprocessing scripts.preprocessing.subsample N normalize() (in module scripts.preprocessing.preprocessing) P preprocessing() (in module scripts.preprocessing.preprocessing) R r_names() (in module scripts.preprocessing.preprocessing) read_anndata() (in module scripts.preprocessing.preprocessing) remove_excluded_samples() (in module scripts.preprocessing.preprocessing) remove_high_mt_cells() (in module scripts.preprocessing.preprocessing) remove_low_count_cells() (in module scripts.preprocessing.preprocessing) remove_samples() (in module scripts.preprocessing.preprocessing) S score_cell_cycle() (in module scripts.preprocessing.preprocessing) scripts.preprocessing.preprocessing module scripts.preprocessing.subsample module set_tpm_counts() (in module scripts.preprocessing.preprocessing) subset_malignant() (in module scripts.preprocessing.preprocessing) W write_anndata() (in module scripts.preprocessing.preprocessing)