Documentation#
CanSig is a package to compare methods for discovering shared transcriptional states in cancer.
Getting started
Check out how to install the necessary environments and download datasets from the currated cancer cell atlas.
Tutorials
The tutorials provide information on running CanSig on new datasets, adding your own method to the benchmark, and reproducing the results from our paper.
API reference
Detailed overview of modules and functions in CanSig.
GitHub
Found a Bug? Facing issuses installing packages? Let us know! We are happy to help.